Refactoring of chemanalysis and a new plot.
Refactoring
- analyse_chemistry is now part of read.Data_ProDiMo
- reac_rates_ix_iz, is now part of the read.Chemistry class
- Each chemanalysis object (Chemistry) now holds a reference to the underlying model (Data_ProDiMo).
- the old read.analyse_chemistry and read.reac_rates_ix_iz are now deprecated.
Plot
- new plot that shows the regions of the main formation and destruction reaction in the disk via a contour plot (similar to the heat/cool) plot.